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Research Rept. Biotechnical Fac. University of Ljubljana
Agricultural Issue. Zootechny
76(Maj 2000)1


BIBLIOGRAPHY OF Prof. Janez POGAČAR, Ph.D.

a) and Nataša SIARD
a) Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia.

Bibliography
Language: Slovene

ABSTRACT
The bibliography includes 452 works written in the years 1965 to 2000. Some unpublished works are also included (mostly the papers presented at the meetings). However, different reports and 20 radio contributions in Kmetijski nasveti (from the period 1965 – 1984) are not included. We estimate that the bibliography covers the majority of the professor`s work, however there are some works we couldn`t find - mostly from the early years of professor`s work. We have tried to complete the bibliography as much as possible with the help of National and University Library (NUK) and Agricultural Institute of Slovenia.


ESTIMATION OF DISPERSION PARAMETERS WITH AN ANIMAL TEST DAY MODEL FOR SLOVENIAN BLACK AND WHITE BREED *

a), Milena KOVAČ and Janez POGAČAR
a) Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
The dispersion parameters for daily milk yield (DMY), fat (FC) and protein (PC) content were estimated in separate analyses on 643 357 test-day records of 29 150 cows in Slovene black and white population. Additionally, 12 173 animals were included into the pedigree file. Records were collected from March 1986 to July 1998. The model includes calving season, age at calving, and stage of lactation as fixed effects and herd, permanent environment, and animal as random effects. Herd effect explained 0.23, 0.06 and 0.09 of the total variance for DMY, FC, and PC, respectively. The similar proportions (0.23, 0.07, and 0.11) were estimated for permanent environment effect. Heritability estimates were 0.20, 0.20, and 0.25 for DMY, FC, and PC, respectively. The procedure allows to predict and use breeding values for younger cows with less or even none records causing the generation interval to be shortened. Before implementation of the model, the economic values of merit traits as well as correlations among the traits considered should be reevaluated.

Kay words: cattle / breeds / Black and White breed / selection / animal model / test day / milk / milk traits

____________________
* The article is a part of a master of science thesis (justification 27. 12. 1999), supervisor Assoc.Prof. Milena Kovač, Ph.D.

ADDITIVE GENETIC AND ENVIRONMENTAL (CO)VARIANCE COMPONENTS FOR MILK TRAITS IN GOAT WITH TEST DAY MODEL

a), Špela MALOVRH, Milena KOVAČ, Dušan BIRTIČ and Drago KOMPAN
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, M.Sc.

Original scientific paper
Language: English

ABSTRACT
Genetic and environmental dispersion parameters for daily milk yield (DMY), fat (FC), protein (PC) and lactose contents (LC) were estimated on 1805 does of Alpine and Saanen breed. During the period 1991-1996, 24044 monthly test days were obtained from 57 herds in Slovenia. (Co)variance components for random effects and residual were estimated by REML using Powell’s algorithm. The models contained season (year-month interaction) and breed as fixed effects, litter size, day of lactation and parity as independent variables, and common flock, permanent environment and additive genetic effect (animal) as random effects. Heritability for DMY was 0.19 - 0.20, for FC was 0.16 - 0.18, for PC was 0.21 - 0.24, and for LC was 0.21 - 0.23. The greatest part of phenotypic variance of FC, PC and LC remained in residual. FC and PC had a negative genetic correlation with DMY (-0.32 and -0.41). Correlation between FC and PC was positive (+0.57), as between PC and LC (+0.27).

Keywords: goats / test day records / milk traits / genetic parameters / variance components / covariance components


THE EFFECT OF ENSILED MAIZE GRAINS ON LAYING OF HENS

a), Jasna M.A. STEKAR, Milena KOVAČ and Antonija HOLCMAN
a)
Institute of Agriculture, Vinarska 14, SI-2000 Maribor, Slovenia, Head of Advisory Service.

Original scientific paper
Language: English

ABSTRACT
In the feeding trial with 600 laying hens of ISA Brown provenance the effect of ensiled maize grains on laying was examined. The laying was monitored since the age 21 weeks. At the age 32 weeks from the flock of 1400 hens 600 animals were chosen at random and divided in six groups. Trial rations were started at age 40 weeks when the hens reached the peak production. The trial had lasted for 154 days when the laying capacity started to decrease considerably. Two maize hybrids Raissa and Lotus were compared. In the ration there were 40% of dry matter from ensiled grains or 60% respectively. Supplemental feeding mixture was equal in both cases. Control animals were fed with complete feeding mixture ad libitum. Other groups fed with silage as well as one group of laying hens fed with complete feeding mixture were given restricted rations. Results of laying before and during the trial were processed by statistical package SAS/STAT (1990). There were no significant differences between the hybrids. Groups with 40% dry matter from the silage had significantly lower laying than the control group, which can be explained by lower energy content. Groups with 60% of dry matter from the silage had better laying than the groups with less silage as well as better laying in comparison with the control groups. Groups with higher metabolic energy content in trial ration had better laying. Energy and protein consumption for egg production differed a lot between the groups due to different contents of protein and energy in the rations and, hence, to diverse number of laid eggs.

Key words: laying hens / laying / animal nutrition / feed / ensiled maize grains


THE EFFECT OF FERTILISATION ON THE NUTRITIVE VALUE OF FORAGE FROM PERMANENT KARST MEADOW. 1 BOTANICAL AND CHEMICAL COMPOSITION, IN VITRO DIGESTIBILITY AND CONCENTRATION OF NET ENERGY FOR LACTATION

a), Janko VERBIČ and Drago BABNIK
a) Agricultural Institute of Slovenia, Hacquetova 17, SI-1001 Ljubljana, Slovenia, senior researcher, Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
Nutritive value of forage from a long term fertilisation experiment was estimated on the basis of concentration of net energy for lactation (NEL) and digestibility of organic matter that were calculated on the basis of chemical composition and gas which was produced during the incubation of samples with rumen liquor in vitro. Unfertilised treatment (0), treatment which was fertilised with phosphorous and potassium (PK) and treatment fertilised with phosphorous, potassium and nitrogen (NPK) were compared. The total yield was separated into grasses, legumes and forbs and analysed separately. Nutritive value of grasses, legumes and forbs was affected by fertilisation only slightly. The concentration of net energy for lactation was considerably higher in legumes than in grasses and forbs: 5.95, 5.24 and 5.36 MJ per kg dry matter respectively. However, due to relatively small differences in proportion of legumes higher concentration of NEL in legumes was not manifested in differences between treatments. Yield of NEL was markedly increased by fertilisation: 12000, 19500 and 34500 MJ per ha in 0, PK and NPK respectively. Differences between variants were due mainly to differences in dry matter yields. Differences in NEL concentration contributed relatively little to differences in NEL yields.

Key words: Karst grassland / fertilisation / grasses / legumes / forbs / in vitro digestibility / net energy for lactation


THE EFFECT OF FERTILISATION ON THE NUTRITIVE VALUE OF FORAGE FROM THE PERMANENT KARST MEADOW. 2. CONCENTRATIONS OF MACRO- AND MICROELEMENTS

a), Vida ŽNIDARŠIČ-PONGRAC, Janko VERBIČ and Jože VERBIČ
a)
Agricultural Institute of Slovenia, Hacquetova 17, SI-1001 Ljubljana, Slovenia, research adviser, Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
A long term fertilizer experiment was designed in 1983 as a randomized block design in four repetitions. In 1994 forage samples were collected on unfertilised variant (0), variant fertilised with phosphorous and potassium (PK) and variant fertilised with phosphorous, potassium and nitrogen (NPK). Samples from the first, second and third cut were separated to grasses, legumes and forbs in which the concentrations of Ca, P, Mg, K, Na, Zn, Mn, Fe, in Cu were determined separately. Based on proportions of single botanical groups (grasses, legumes and forbs) the concentrations of elements in forage were calculated. Concentrations of the majority of elements in grasses, legumes and forbs of all three cuts were significantly affected by fertilisation. PK fertilisation reduced the concentrations of Mg and Mn and increased the concentration of P and K in forage. Compared to the unfertilised variant (0), NPK fertilisation reduced the concentration of Fe and increased the concentrations of P, K and Zn. Nitrogen fertilisation (NPK vs. PK) significantly increased the concentrations of P, Mg, Zn and Mn and reduced the concentration of Ca. With the exception of Cu, the concentration of all minerals analysed was significantly affected by consecutive cut. The concentrations of Ca, Mg and Mn were in second- and third-cut forage higher than in the first-cut forage. The highest concentrations of P and Zn were recorded in third-cut forage. Legumes and forbs contained two to three times more Ca, Mg, Zn and Cu than grasses. Therefore, the concentrations of these elements in forage were affected markedly by botanical composition of the sward. With respect to the requirements of dairy cows in lactation a large deficit of Na, Zn and Cu was observed while P was deficient only in forage from unfertilised variant.

Key words: Karst grassland / fertilisation / grasses / legumes / forbs / nutritive value / macroelements / microelements


COMET ASSAY IN NUTRITION INVESTIGATION MODEL*

a), Tanja PAJK and Karl SALOBIR
a) Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Ass.Prof., Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
Food is strongly connected with the formation of free radicals in human or animal body. It is also important for the protection against them. Polyunsaturated fatty acids for instance increase the free radicals load of the organism. Antioxidants neutralize free radicals. The comet assay (Single Cell Gel Electrophoresis) was introduced for the in vivo testing of nuclear DNA damage in laboratory mice. Four groups of test animals and one control group were fed with fodder of the same basic composition but with different fats included: 1) 10% oleic acid rich sunflower oil, 2) 10% sunflower oil, 3) 10% rape oil, 4) 10% lard, 5) control group, 2% oleic acid rich sunflower oil. No antioxidants were added to the oils, lard or feeds. The energy ratio of fats in fodder was 16% in the control group and 32% in the rest test groups. Different degrees of mice leucocyte DNA damage were detected in the experiment. The highest degree of DNA damage (2.72) was found in the group fed with oleic acid reach sunflower oil. The lowest degree of DNA damage was found in the control group. Data were processed with the SAS/STAT (1990) program package. The results obtained indicate that comet assay is sensitive enough to differenciate the quality of nutritional fats from the view of free radicals formation.

Key words: human nutrition / fats / antioxidants / oxidative stress / DNA / comet assay

____________________
* The work is a part of CRP project entitled Feeding Influences on the Quality of Food of Animal Origin and the Nutritional Complementary Value of the Foods of Plant Origin, V4-9118-0402-98, financed by the Ministry of agriculture, forestry and nutrition and the Ministry of science and technology.

THE USE OF FLOW CYTOMETRY AND OLIGONUCLEOTIDE PROBES FOR BACTERIAL COMMUNITY STRUCTURE ANALYSIS IN BIOLOGICAL WASTEWATER TREATMENT SYSTEMS

a) and Gorazd AVGUŠTIN
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia.

Original scientific paper
Language: Slovene

ABSTRACT
Investigation of microbial community structure in activated sludge is often complicated. When not only total bacterial counts, but also counts of bacterial subpopulations are to be determined, existing methods are not successful. In the present article, a method for analysis of activated sludge with two, differently labelled oligonucleotide probes and affiliated flow cytometric detectors is described. Oligonucleotide probes EUB338-Cy3 and fD1-FITC, specific for all bacteria were used to set the experimental model for flow cytometry analysis. This model was than used to analyze activated sludge sample with 16S rRNA targeted probe NSO190-FITC, specific for amonia oxidizing bacteria from b - subclass of Proteobacteria. In the examined sample 16.3% of bacteria hibridized with this probe. Finally, effects of tripan blue on cell autofluorescence and probe-specific fluorecence were investigated. Tripan blue did not alter the FITC-probe-specific fluorescence, while the level of autofluorescence and nonspecific fluorescence dropped.

Key words: wastewater treatment systems / biological wastewater treatment systems / activated sludge / microbiology / bacteria / analytical methods / rRNA probes / flow cytomtery / amonia-oxidizing bacteria


MOLECULAR CLONING OF THE rRNA GENES OF Prevotella bryantii B14

a) and Gorazd AVGUŠTIN
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, M.Sc.

Original scientific paper
Language: English

ABSTRACT
Parts of the rRNA operons of anaerobic rumen bacteria Prevotella bryantii B14 were cloned. 350 colonies carrying pBluescriptII with HindIII DNA fragments were screened with 16S rDNA specific probe and six positive clones were obtained. Inserts with 16S rRNA genes were identified by hybridisation with digoxigenin labelled Prevotella-Bacteroides 16S rRNA specific probe. All six inserts were approximately 2 kb long and contained large parts of the 16S rRNA gene, 16S-23S rRNA internal spacer region and approximately 100 bp of 23S rRNA gene. The origin of 16S rRNA genes were confirmed by PCR with P. bryantii 16S rRNA specific primer.

Key words: microbiology / bacteria / Prevotella bryantii / molecular genetics / ribosomal RNA operons / cloning / rumen


GENETIC DIVERSITY OF BACTERIA INHABITING THE GUT OF ISOPODS
(Isopoda, Crustacea)

a), Jasna ŠTRUS and Gorazd AVGUŠTIN
a) Univ. of Ljubljana, Biotechnical Fac., Dept. of Biology, Večna pot 111, Sl-1000 Ljubljana, Slovenia, assistent, M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
Rod-like bacteria attached to cuticular spines in the hindgut of the terrestrial isopod Porcelio scaber were observed by scanning electron microscopy. The attached bacteria could represent the autochthonous microbial flora, which has not been reported yet. Because the observed bacteria can not be cultured, molecular approach to identification was applied. Total DNA was isolated from well rinsed hindguts of five healthy and mature isopods and subsequently bacterial 16S rDNA genes were amplified. The amplified genes were incorporated into plasmid vector and transformed into E.coli competent cells. Plazmid DNAs from 37 transformants were subjected to restriction analysis with Dde I and Taq I endonucleases. An RFLP phenogram was constructed using the UPGMA method. 16S rRNA genes can be clustered into at least three distinctive groups which could indicate that several bacterial species are attached to the cuticular spines in the hindgut of P. scaber.

Key words: isopoda / intestine / microbiology / bacteria / genetic diversity / 16S rDNA / RFLP



  AUTHOR'S INDEX
 

No.

Author

Page of the primary source

1.

AVERDUNK Gottfried

13

2.

AVGUŠTIN Gorazd

113 - 122, 123 - 129, 131 - 139

3.

BABNIK Drago

83 - 93, 95 - 104

4.

BIRTIČ Dušan

61 - 66

5.

BREŽNIK Suzana

61 - 66

6.

GRBEC Cvetka

15 - 48

7.

HOLCMAN Antonija

67 - 81

8.

KOMPAN Drago

61 - 66

9.

KOSTANJŠEK Rok

131 - 139

10.

KOVAČ Milena

49 - 60, 61 - 66, 67 - 81

11.

LIPOGLAVŠEK Luka

113 - 122

12.

MALOVRH Špela

61 - 66

13.

MARINŠEK LOGAR Romana

105 - 111

14.

PAJK Tanja

105 - 111

15.

PETERKA Matjaž

123 - 129

16.

POGAČAR Janez

49 - 60

17.

POTOČNIK Klemen

49 - 60

18.

SALOBIR Karl

105 - 111

19.

SIARD Nataša

15 - 48

20.

STEKAR Jasna M.A.

9, 11, 67 - 81

21.

ŠTRUS Jasna

131 - 139

22.

TKALČIČ Eva

67 - 81

23.

VERBIČ Janko

83 - 93, 95 - 104

24.

VERBIČ Jože

83 - 93, 95 - 104

25.

ŽNIDARŠIČ-PONGRAC Vida

95 - 104

 

University of Ljubljana Biotechnical Faculty