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Research Rept. Biotechnical Fac. University of Ljubljana
Agricultural Issue. Zootechny
76(November 2000)2


LIST OF AUTHORS FROM 1976 TO 2000

a)
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia.

Review of authors
Language: Slovene

ABSTRACT
In the present list the authors who have published their papers in the Research Rept. of the Biotechnical Fac. of Univ. of Ljubljana. Agricultural Issue. Zootechny are sorted in alphabetical order. Each entry contains besides author’s name the volume, year and number of the Research Reports as well as pages of the published article. There are 288 authors. More than 50% of authors published their articles once while 18 authors more than ten times.

Key words: authors / list / serial publications


CLASSIFICATION OF ARTICLES PUBLISHED OVER 25 YEARS

a) and Jože STOPAR
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Prof., Ph.D.

Review of authors
Language: Slovene

ABSTRACT
In the 25 years of publishing the special number of Research Reports (Research Rept. Biotechnical Fac. Univ. of. Ljubljana. Agricultural Issue. Zootechny) 390 articles written by 288 authors appeared. Most of articles, 80%, are original scientific papers, 9.5% are review papers; 23% of authors work at the Zootechnical Department, 19% of authors are from abroad, 27% are young researchers (graduates, post-graduates and doctoral candidates) and 31% are from other institutions and enterprises.

Key words: authors / papers / types of papers / serial publications


DAIRY TECHNOLOGY ON THE TURN OF THE MILLENNIUM *

a)
a)
Swiss Federal Institute of Technology, Institute of Food Science, Laboratory of Dairy Science, CH-8092 Zürich, Switzerland, Prof., Ph.D.

Review paper
Language: English

ABSTRACT
In general, the incentive for developing new technologies is determined by a) the need for increased product safety, economy and protection of the environment for existing products; b) the demand of consumers and the market for new dairy products and for foods containing milk ingredients. Membrane technology for separation and concentration of milk offers possibilities in the manufacture of existing consumer products such as cheese, liquid and fermented milk products as well as for the preparation of tailor-made products. One of the emerging technologies is the use of ultra-high-pressure because of its marked influence on milk proteins including enzymes, on lipids and on microorganisms. As this is a very costly technology, its application within the dairy industry may, therefore, be limited to special products. Despite the fact that the manufacturing process for all fermented dairy products includes biological operations, the introduction of new biotechnological methods to transform milk ingredients, the production of specific metabolites and continuous fermentation processes will increasingly gain importance in dairy plants. Energy saving in dairy industry will remain an important task for the technologists of the future. The milk industry is facing increasing product competition. Consequently, the intensive co-operation between industry and basic research is vital.

Key words: dairying / milk / milk products / technology 

____________________
* The paper was presented on the 2nd Slovenian congress with international participation Milk and Dairy Products, Portorož, November 14-16, 1999.

SLOVENIAN FERMENTED MILK WITH PROBIOTICS

a) and
a)
University of Zagreb, Faculty of Food Technology and Biotechnology, Pierottijeva 6, HR-10000 Zagreb, Croatia, Prof., Ph.D.

Original scientific paper
Language: English

ABSTRACT
The concept of functional foods and probiotics is a novelty in former Eastern block. The Croatian and Slovenian dairy industries are the first that launched probiotic. In this work, samples of probiotic fermented milks purchased from Slovenian market were stored within 25 days at three different temperatures (4° C, 20° C, 37° C), and changes in acetaldehyde, ethanol and diacetyl were determined. Above chemical compounds have a high impact on the desired product flavour. At the same time sensory evaluation was carried out. Acetaldehyde and ethanol concentration were determined by aldehyde dehydrogenase and alcohol dehydrogenase methods. Diacetyl was measured by modification of the Hill’s colorimetric method. Sensory analysis was conducted by five member panel, using a scoring system with weighted factors in the 20-point scale. The concentration of these flavour compounds changed during storage depending on duration and temperature in depot. Acetaldehyde content decreased at each temperature level during 25-days storage. Diacetyl and ethanol content increased with duration at all temperature levels. Sensoric quality decreased with duration and was closely related to changes in the content of aroma compounds. Changes of all investigated parameters were pronounced on higher temperature levels. Thus, there were no significant changes during the refrigerated storage at 4°  C while at the other two temperature levels results pointed out significant differences between the values before and after storage.

Key words: milk / milk products / probiotics / yoghurt / probiotic yoghurt / sensory properties / aroma compounds / Slovenia


IMPORTANCE OF COMPENSATORY AND STRUCTURAL PAYMENTS FOR SLOVENIAN MILK PRODUCTION

a), Aleš KUHAR and Emil ERJAVEC
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, higher lecturer., Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
Significant level of market-price support measures for milk production is a reality of European agricultural policy. However, simultaneously with reduction of support to agriculture, various types of budget support measures are becoming increasingly important to compensate declined farmers’ incomes. It has not yet been decided whether also the candidate countries are going to participate in these support schemes. The paper aims at an assessment of the impact of direct payments and structural support measures on Slovenian milk market. Their effects on incomes of dairy farmers as well as on producers’, consumers’ and taxpayers’ welfare are analysed. Policy Analysis Matrix (PAM) in combination with Agricultural Policy Analysis Simulator (APAS) methodology has been applied for simulation of different policy scenarios’ effects on these important economic indicators. Analysis of different levels of CAP measures is carried out for the period after accession. Results obtained show extreme importance of both direct payments and structural support measures for all indicators under investigation and therefore argue for their complete implementation. In the case of Slovenian accession before next reform of Common market organisation for milk, structural mechanisms have higher impact, but increasing importance of direct payments is foreseen after 2005/06. Absence of one or another leads to stagnation of Slovenian milk production, which due to its low competitiveness has no good prospects also under optimistic scenarios. In the case of appropriate pre-accession agricultural policy strategy, satisfactory outcome of accession negotiations seems to be more realistic.

Key words: milk production / agricultural policy / compensatory payments / structural payments / modelling / Slovenia / EU


ESTIMATION OF ENERGY VALUE OF GRASSLAND FORAGE

a) and Jože VERBIČ
a)
Agricultural Institute of Slovenia, Hacquetova 17, SI-1001 Ljubljana, Slovenia, research adviser, Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
Concentration of metabolizable energy (ME) and net energy for lactation (NEL) of 19 samples of green forage, 5 samples of grass silage and one sample of hay with known in vivo measured digestibility were estimated according to official German system (DLG, 1997). Energy value and organic matter digestibility (dOM) were comparatively estimated on the basis of chemical composition and digestibilities from tables. It was established that on the basis of data form DLG tables dOM was underestimated for 2.1 ± 3.95%, concentration of ME for 0.29 ± 0.52 MJ and concentration of NEL for 0.21 ± 0.37 MJ kg-1 dry matter (DM). Somewhat lower deviation from in vivo estimates were obtained in estimation of ME (0.04 ± 0.45 MJ kg-1 DM) and NEL (0.03 ± 0.33 MJ kg-1 DM) on the basis of chemical composition and regression equations from literature (GfE, 1998). By the use of Hohenheim gas production test (in vitro) and adequate regression equations from literature the accuracy of estimate was increased markedly. Relatively precise was found to be the equation by (Menke and Steingass, 1987), which in comparison to in vivo estimation underestimated the concentration of ME for 0.12 ± 0.26 MJ and concentration of NEL for 0.09 ± 0.19 MJ kg-1 DM. Equations by Aiple et al. (1995) overestimated in vivo estimated concentration of ME for 0.15 ± 0.24 MJ kg-1 DM and concentration of NEL for 0.10 ± 0.17 MJ kg-1 DM. The major part of variability in concentration of ME can be explained with multiple regression equation on the basis of gas production, which is developed during the incubation of samples with rumen liquor and concentration of crude fat (R2 = 0.96).

Key words: forage / grassland / energy value / chemical composition / digestibility


VARIABILITY IN ZINC CONTENT IN DIFFERENT GRASS SPECIES AND RED CLOVER

a), Andrej LAVRENČIČ and Jože STOPAR
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Prof., Ph.D.

Original scientific paper
Language: Slovene

ABSTRACT
In 1997 on seven different plots of the same ground in four periods and in different stages of growth in each period ten samples of red clover (Trifolium pratense) and Italian ryegrass (Lolium multiflorum) and eight samples of timothy (Phleum pratense), perennial ryegrass (Lolium perenne), meadow fescue (Festuca pratensis), red fescue (Festuca rubra) and orchardgrass (Dactylis glomerata) were collected. In the soil sample the pH value of 7.2 and 75.8 mg zinc kg-1 were established. On the average grass samples contained 20.36 mg and red clover 26.43 mg zinc kg-1 DM. The lowest zinc concentration was found in samples of red fescue (16.92 mg kg-1 DM). In perennial ryegrass the zinc content was 18.13 mg, in meadow fescue 18.66 mg and in orchard grass 20.84 mg kg-1 DM. The highest value was found in timothy (23.66 mg kg-1 DM) and in Italian ryegrass (23.77 mg kg-1 DM). Differences between grasses were statistically significant. In the first harvest a statistically significant change in zinc concentration with maturity of plants was demonstrated (22.44 mg, 19.57 mg and 16.47 mg kg-1 DM for vegetative, heading and flowering stage of growth respectively). Between zinc concentrations in samples of first harvest and of second harvest there were no significant differences (19.49 mg and 20.22 mg kg-1 DM, respectively). In samples collected in the third harvest zinc concentration was higher (24.29 mg kg-1 DM), P< 0.05) than in first and second harvest. The highest value was found in samples of the autumn harvest (26.91 mg kg-1 DM, P< 0.05). Differences between zinc concentrations in timothy, perennial ryegrass and Italian ryegrass samples collected in the first harvest and in autumn harvest were very high (+78.4%, +68.0% and +58.4%, respectively).

Key words: grasses / legumes / red clover / composition / zinc


SULPHUR AND CHLORINE CONTENT IN FORAGES FROM DEFINED REGION

Marija RAJČEVIČ a), Anton ILC, Peter KUMP and Marijan NEČEMER
a)
Poslovni sistem Mercator, d.d., Dunajska 107, SI-1113 Ljubljana, Slovenia, senior scientist., Ph.D., M.Sc.

Original scientific paper
Language: English

ABSTRACT
In 1999 5 samples of pasture grass, 13 samples of grass silage, 6 samples of hay and 7 samples of maize silage were taken at random. All samples were from the defined region, and the forage was produced in similar soil and weather conditions. The grass botanical composition was comparable as well. The pasture and grasslands were manured by pig and bovine slurry. The content of sulphur and chlorine was determined by roentgen fluorescent analysis. Grass dry matter contained 2.56 ± 0.70 g of sulphur (CV = 27.29%) and 9.15 ± 4.18 g of chlorine (CV = 45.49%), grass silage 2.38 ± 0.49 g of sulphur (CV = 20.67%) and 7.19 ± 1.89 of chlorine (CV = 26.34%), hay 1.93 ± 0.48 g of sulphur (CV = 24.84%) and 5.72 ± 1.98 of chlorine (CV = 34.68%), and maize silage contained 0.88 ± 0.25 g of sulphur (CV = 28.14%) and 1.98 ± 0.86 g of chlorine (CV = 43.39%). Some results for sulphur as well as for chlorine deviated a great deal from the mean value and median. More attention should be paid to collection and preparation of samples for the analysis and determination of ash insoluble in hydrochloric acid.

Key words: forage / composition / sulphur / chlorine / content


FATTY ACID COMPOSITION OF EDAM, EMMENTAL AND GOUDA CHEESES PRODUCED IN SLOVENIA IN AUTUMN 1997

a) and Vekoslava STIBILJ
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia.

Original scientific paper
Language: English

ABSTRACT
The aim of our work was to determine fatty acid composition of three different types of cheeses - Edam, Gouda and Emmental, produced in Slovenia in autumn 1997. The analysed Edam and Gouda cheese was produced by three and Emmental cheese by two different producers. All samples were purchased in the local supermarkets twice in the period of three months in autumn 1997. The methyl esters of the fatty acids were prepared by in situ transesterification (ISTE) and determined by gas chromatography. The average total SAT (saturated fatty acids) content was 56.80 wt % (relative percentage for each fatty acid of the total fatty acids) for Emmental cheese, 56.62 wt % for Edam cheese and 57.49 wt % for Gouda cheese. The average total MUFA (monounsaturated fatty acids) content was 34.26 wt % for Emmental cheese, 34.28 wt % for Edam cheese and 33.45 wt % for Gouda cheese. The average total PUFA (polyunsaturated fatty acids) content was 5.30 wt % for Emmental cheese, 5.74% for Edam cheese and 5.64% for Gouda cheese. No great difference was found between three types of cheese concerning the fatty acid profile (wt %).

Key words: milk products / cheese / Edam / Emmental / Gouda / composition / fatty acids / Slovenia


RANDOM REGRESSION MODELS *

a) and Milena KOVAČ
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept.
, Groblje 3, SI-1230 Domžale, Slovenia, Assist.

Review paper
Language: Slovene

ABSTRACT
Performance of breeding animals is frequently measured on successive intervals, like milk traits, growth, feed intake, and exterior. The traits collected at different time or different places are not independent. Their average as well as standard deviation changes over time, and the correlation depends on the distance among them. For such kind of data, random regression models (RRM) describing production functions combined with covariance functions accommodating time- (place-)dependent (co)variance components are the method of choice. The models are compared to lactation yield models, to test interval model, and fixed regression models based on literature review, and illustrated using data from Slovenian black-white dairy-cattle population. RRMs reflect better biological background of animal performance over time and allow selection on the overall production level as well as the shape of production curve. They are in favor of more flexible recording scheme and thus, cost reduction for data collection. Furthermore, the genetic evaluation can be performed before lactation is finished shortening the generation interval and can be done more frequently giving a useful tool for herd management.

Key words: breeding animals / performance / models / random regression / RRM

____________________
* This paper is a part of disertation thesis, supervisor assoc.prof. Milena Kovač, Ph.D.

FERTILITY AND MILK YIELD OF COWS IN BOHINJ AREA *

a), Andrej OREŠNIK and Milena KOVAČ
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Assist.

Language: Slovene

Professional paper
ABSTRACT
In 1996 on 17 family farms in Bohinj area data on 193 lactations were analysed. Diferent cattle breeds were reared on farms: Simmental (51.4%), Black-and-White (31.3%), Brown (2.5%), Pinzgau (2.5%) and unknown breeds (12.3%). Milk yield and fertility traits were analysed for 156 cows. Thirty-seven cows were culled for different reasons. The average milk yield in the lactation was 5590 ± 1988 kg and in standard lactation 5178 ± 1687 kg, and milk yield per feeding day was 14.2 ± 4.8 kg. Calving to conception interval lasted on average 113.8 ± 62.3 days. Calving interval was 400.2 ± 69.1 days. Conception rate was on average 65.2%. Calving interval, parity and breeder significant by affected on milk yield per feeding day (FD). The highest milk yield per FD was achieved with calving intervals between 341 and 365 days. Prolonged calving interval increased the average milk yield in standard lactation. Calving to conception interval was significantly correlated (P< 0.0001) with all fertility traits, milk yield in lactation, and milk yield in standard lactation. Number of inseminations was correlated with milk per FD (r = -0.1769, P< 0.0271). Distribution analyses of diferent fertility traits showed that low heat detection rate (62.1%) folowed by prolonged insemination to conception interval was a major problem that caused the prolongation of calving interval on analised farms. On four farms, where heat detection rate was 100%, calving to conception interval lasted 83 days and first insemination to conception interval 21 days on average.

Key words: cattle / dairy cows / fertility / milk yield / Slovenia 

____________________
* The paper is a part of graduation thesis (justification September 14, 1998), supervisor prof. Andrej Orešnik, Ph.D., co-advisor assoc.prof. Milena Kovač, Ph.D.

PRODUCTION PROPERTIES OF THE BLACK SLAVONIAN PIG BREED

Marija UREMOVIÆ a), Zvonimir UREMOVIÆ and Zoran LUKOVIÆ
a)
Faculty of Agriculture, University of Zagreb, Department for animal science, HR-10000 Zagreb, Croatia, Prof., Ph.D.

Preliminary report
Language: English

ABSTRACT
The paper discusses the situation in the endangered autochthonous Black Slavonian Breed, developed in Croatia. A program for preserving this breed was initiated in 1996, which allowed the size of effective population (Ne) to grow from 18.46 to 32.32. Production properties of the Black Slavonian Breed are presented, i.e. litter size and fattening properties. According to the obtained results, production properties of this breed are rather limited. The number of liveborn and reared pigs per litter is 6.89 and 5.76 respectively. Under extensive conditions of fattening, daily gain in body mass starting at 27.20 and reaching 106.05 kg was 478 g, meat percentage being 42.95%.

Key words: pigs / autochthonous breeds / Black Slavonian breed / production properties / litter size / daily gain / meat percentage


APPLICATION OF MICROSATELLITES FOR DETECTION OF TETRASOMIC REGIONS IN GRAYLING (Thymallus thymallus) GENOME *

Simona SUŠNIK, a), Jurij POHAR and Peter DOVČ
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Assist., Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
The mode of inheritance of 18 microsatellite loci in grayling genome was studied. At fifteen microsatellite loci two alleles were found and additional amplification products at three loci. The possibility that additional products would be the consequence of non-specific amplification, was rejected. There is an indication that some regions of grayling genome reflect partial tetrasomic state of the genome or duplication of some chromosomal regions.

Keywords: fish / grayling / molecular genetics / genome / microsatellites / tetraploidy

____________________
* This paper is a part of disertation thesis, supervisor assoc.prof. Peter Dovč Ph.D.

PREPARATION OF PEROXIDASE CONJUGATED MONOCLONAL ANTIBODIES AGAINST G CLASS OF CHICKEN IMMUNOGLOBULINS (IgY) *

Mateja REJC, a), Dušan BENČINA and Franc HABE
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Ass.Prof., Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
Infections of poultry with pathogen microorganisms are relatively frequent and can cause great economic loss. Most of bacterial or virus infections can be indirectly detected by demonstration of specific antibodies. The most frequently used are indirect immunoenzyme assays where specific serum imunoglobulins of class Y (IgY), which is an avian homologue of mammals’ class G (IgG), are demonstrated. Beside the appropriate antigen in such assays, the secondary antibodies against chicken IgY, conjugated with enzyme are necessary. IgY isolated from chicken egg yolk were used for immunization of BALB/c mice and monoclonal antibodies (mAb), designated M2 were designed and conjugated with horseradish peroxidase (M2-p). MAb M2 recognized determinants on chicken, turkey, pheasant and peacock IgY. Determinant is a part of heavy chain of chicken IgY and is probably not glycosilated. For use of conjugate M2-p in direct immuno-enzyme assays pH optimum, optimal working dilution and affinity were determined. Very wide range of pH (from 3 to 11) values, where mAb M2 reacts with IgY indicates a high affinity of binding. Results obtained so far indicate that our conjugate M2-p is appropriate for use in immunoenzyme assays for detection of specific antibodies IgY in chicken, turkey, pheasant and peacock.

Key words: poultry / immunology / immunoglobulins Y / monoclonal antibodies / conjugation / peroxidase / conjugated antibodies 

____________________
* The paper is a part of graduation thesis (justification June 22, 1999), supervisor prof. Franc Habe, Ph.D., co-advisor ass.prof. Mojca Narat, Ph.D.

DNA ISOLATION FROM EQUINE FAECAL EXCREMENTS

Martina WEISS, Katarina TEPŠIČ and a)
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Assoc.Prof., Ph.D., M.Sc.

Original scientific paper
Language: English

ABSTRACT
Sampling and extraction procedures were elaborated for DNA isolation suitable for subsequent PCR amplification and other molecular manipulation experiments from horse excrements. Eleven Lipizzaner horses were split into two age groups and faecal excrements were collected as soon as possible after defecation and the DNA was isolated immediately after arrival to the laboratory. The excrements collected from the group of younger horses yielded on average 3-4 fold higher amounts of DNA than from the group of older horses. The variability of the DNA yield isolated on successive days from the same horse remained within 15% of the average yield. The DNA yield isolated on successive days from the same faecal excrement increased gradually from 4.61 to 7.96 μg g-1 faeces until 48 hrs after defecation and dropped only slightly to 7.51 μg g-1 after further four days. Our results indicate, that substantial microbial growth is taking place in the faecal excrements at least until two days after defecation. It is of utmost importance therefore, that the sampling is done as soon as possible after defecation if microbial community structure analysis of the equine colon and faeces is to be performed.

Key words: horses / molecular genetics / DNA / excrements / isolation / yield


HORIZONTAL GENE TRANSFER IN BACTERIA: AN ECOLOGICAL AND EVOLUTIONARY PERSPECTIVE

Matjaž PETERKA, Tomaž ACCETTO and a)
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Assoc.Prof., Ph.D., M.Sc.

Review paper
Language: English

ABSTRACT
In recent years, molecular genetics and genome analysis provided extensive evidence that gene loss and acquisition are likely to be the primary mechanisms by which bacteria genetically adapt to novel or changed environments and by which bacterial populations diverge and form separate, evolutionary distinct species. Three mechanisms of gene transfer have been identified in microorganisms: transformation, conjugation and transduction, but our knowledge concerning horizontal gene transfer in the environment was and still is very limited. Animal gut and in particular the rumen belong to the most complex microbial ecosystems. Conditions in the rumen potentially favour horizontal gene transfer with conjugation and transduction, due to large, diverse and dense bacterial and bacteriophage populations, however, there is very little evidence supporting theoretical assumptions. A brief review of current knowledge on horizontal gene transfer is presented with the emphasis on the available data and views concerning the process going on in the rumen.

Key words: microbiology / bacteria / molecular genetics / horizontal gene transfer / evolution / transformation / conjugation / transduction


ISOLATION OF THE btsT GENE ENCODING THIOESTERASE AND CONSTRUCTION OF VECTOR FOR ITS INSERTION MUTAGENESIS IN Bacillus licheniformis *

a)
a)
Krka, Pharmaceutical, Šmarješka cesta 6, SI-8000 Novo mesto, Slovenia.

Original scientific paper
Language: Slovene

ABSTRACT
Next to almost all prokaryotic operons encoding peptide synthetases, which are involved in the synthesis of peptide antibiotics, distinct genes have been detected that encode proteins with strong sequence similarity to thioesterases. The mechanism and function of thioesterases in peptide synthesis is not known. Antibiotic bacitracin, produced by Bacillus licheniformis, is synthesised by a large multienzyme complex composed of the three bacitracin synthetases BA1, BA2 and BA3. Genes encoding bacitracin synthetases are organised in the bac operon. Upstream of the bac operon is btsT gene encoding thioesterase. In order to investigate the influence of thioesterase on bacitracin biosynthesis 1.2 kb fragment was isolated from chromosomal DNA B. licheniformis by using PCR . This fragment consists of almost entire btsT gene and complete promotor region of bac operon. Fragment has been hybridised with B. licheniformis BA1 chromosomal DNA. In addition the Tc resistance gene (tetM) was inserted into the fragment to construt vector for insertion mutagenesis of the btsT gene.

Key words: microbiology / bacteria / Bacillus licheniformis / peptide antibiotics / synthesis / enzymes / bacitracin peptide synthetases / thioesterases / molecular genetics / vector for insertion mutagenesis 

____________________
* The paper is a part of graduation thesis (justification November 2, 1999), supervisor ass.prof. Blagajana Herzog Velikonja, Ph.D.

ISOLATION AND CHARACTERIZATION OF RUMINAL SPIROCHETES

Marija TRKOV, Tomaž ACCETTO and a)
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Assoc.Prof., Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
Three strains of rumen spirochetes have been isolated from the rumen fluid sample. Phase-contrast and epifluorescence microscopy have been used for morphological observation of isolated strains. For further characterisation rapid biochemical tests (API 50CH) and molecular biological analysis have been used. The morphological observations showed that two of the isolated strains SM1 and SM3 are similar and differ significantly from the strain SM2. All three isolated strains of rumen spirochetes are Gram-negative. The SM1 and SM3 cells were smaller than SM2 cells. Smaller were also the amplitude and the wavelength of coils of SM1 and SM3 cells. SM1 and SM3 strains utilised seven of 49 tested charbohydrates, whereas strain SM2 utilised additional 14 sugars. The literature data describing sugar fermentation in T. bryantii and T. saccharophilum showed significant differences between type strains T. bryantii and T. saccharophilum and strains SM1 and SM3. The strain SM2 seems to be similar to the type strain of T. saccharophilum. Large differences between analysed strains were found with theoretical and experimental RFLP analysis using different restriction enzymes of the 16S rRNA gene.

Key words: microbiology / spirochetes / isolation / characterization / rumen


ISOLATION AND CHARACTERIZATION OF BACTERIOPHAGES OF RUMEN BACTERIUM Prevotella bryantii TC1-1

Darja FERME, Jerneja AMBROŽIČ, Miklavž GRABNAR, Maja RAVNIKAR and a)
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Assoc.Prof., Ph.D., M.Sc.

Original scientific paper
Language: English

ABSTRACT
Sampling, inoculation and extraction procedures were elaborated for the isolation of bacteriophages from cattle rumen fluid. Several strains from four different species of rumen bacterial genus Prevotella were used as indicator organisms as well as Escherichia coli, Salmonella sp. and Yersinia enterocolitica strains. Only one strain, i.e. P.bryantii TC1-1 was successfully infected with filter sterilised rumen fluid inoculum containing rumen bacteriophages. Two plaque morphotypes were observed, both being turbid and rather small but clearly different in size. The preliminary transmission electron microscopy analysis showed that all observed bacteriophages have presumably icosahedral symmetry. The infection trials of other Prevotella strains with isolated bacteriophages from the strain TC1-1 were successful only with type strains of species P.bryanti and P.brevis respectively. Bacteriophage purification and long term storage procedures were elaborated.

Key words: microbiology / bacteriophage / bacteria / isolation / characterization / TEM / rumen


THE INFLUENCE OF SUBSTRATE CONCENTRATION AND GROWTH PHASE ON EXPRESSION OF Butyrivibrio sp. Mz5 ENDOXYLANASES

a), Romana MARINŠEK LOGAR, Tadej ČEPELJNIK and Franc V. NEKREP
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia.

Original scientific paper
Language: English

ABSTRACT
Butyrivibria represent a significant proportion of bacterial isolates from different ruminants. The strain Butyrivibrio sp. Mz5 was originally isolated from the rumen of a black and white Frisian cow. It possesses very high xylanolytic activity, at least 1.65 times higher than any of the tested anaerobic bacteria, as shown earlier. The inducibility by substrate, the influence of substrate concentration and growth phase on expression of its endoxylanases were tested in the present work. Xylanase activity of Butyrivibrio sp. Mz5 was found to be inducible, the specific activity of cells grown on xylan being increased 34-fold in comparison with cells grown on soluble carbon sources. The 51 kDa- and 145 kDa-endoxylanases are constitutive. The highest xylanolytic activity was detected after 16 hours growth and at 0.5% xylan concentration in growth medium. The majority of the xylanolytic activity was cell bound. Lower concentrations of xylan promoted the release of xylanolytic enzymes into the medium. The 26.7 kDa endoxylanase showed resistence to lower pH. The data obtained will help to achieve maximal xylanolytic activity for the needs of enzyme purification.

Key words: microbiology / anaerobic bacteria / Butyrivibrio sp. Mz5 / enzymes / xylanases / enzyme expression



AUTHOR'S INDEX
 

No.

Author

Page of the primary source

1.

ACCETTO Tomaž

163-173, 181-190

2.

AMBROŽIČ Jerneja

191-197

3.

AVGUŠTIN Gorazd

153-161, 163-173, 181-190, 191-197

4.

BABNIK Drago

61-74

5.

BENČINA Dušan

143-151

6.

ČEPELJNIK Tadej

199-206

7.

DOVČ Peter

135-142

8.

ERJAVEC Emil

47-60

9.

FERME Darja

191-197

10.

GRABNAR Miklavž

191-197

11.

HABE Franc

143-151

12.

HRUŠKAR Mirjana

41-46

13.

ILC Anton

87-94

14.

KAVČIČ Stane

47-60

15.

KOMAN RAJŠP Mojca

95-101

16.

KOVAČ Milena

103-117, 119-130

17.

KUHAR Aleš

47-60

18.

KUMP Peter

87-94

19.

LAVRENČIČ Andrej

75-85

20.

LOGAR Alojz

119-130

21.

LUKOVIÆ Zoran

131-134

22.

MALOVRH Špela

103-117

23.

MARINŠEK LOGAR Romana

199-206

24.

NARAT Mojca

143-151

25.

NEČEMER Marijan

87-94

26.

NEKREP Franc V.

199-206

27.

OREŠNIK Andrej

75-85, 119-130

28.

PETERKA Matjaž

163-173

29.

POHAR Jurij

135-142

30.

PUHAN Zdenko

31-40

31.

RAJČEVIČ Marija

87-94

32.

RAVNIKAR Maja

191-197

33.

REJC Mateja

143-151

34.

SLADIČ Gordan

175-180

35.

SNOJ Aleš

135-142

36.

STEKAR Jasna M. A.

7 (9), 27-30, 207

37.

STIBILJ Vekoslava

95-101

38.

STOPAR Jože

11-25, 27-30, 75-85

39.

SUŠNIK Simona

135-142

40.

TEPŠIČ Katarina

153-161

41.

TRKOV Marija

181-190

42.

UREMOVIÆ Marija

131-134

43.

UREMOVIÆ Zvonimir

131-134

44.

VAHČIÆ Nada

41-46

45.

VERBIČ Jože

61-74

46.

WEISS Martina

153-161

47.

ZOREC Maša

199-206

 

University of Ljubljana Biotechnical Faculty