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Zb. Bioteh. Fak. Univ. Ljubl., Kmet. Zooteh., 80(December 2002)2, 115–128.

EU ACCESSION DIRECT PAYMENT ISSUE AND FARM INCOMES IN SLOVENIA

a), Stane KAVČIČ, Miroslav REDNAK and Tina VOLK
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Assoc. Prof., Ph.D.

Original scientific article
Language: English

ABSTRACT
In this article estimation of gross value added (GVA) applying extended economic account for agriculture (EAA) model and partial equilibrium APAS-PAM model has been carried out to emphasize the importance of direct payments for farm incomes in Slovenia after its EU accession. Scenario analysis for hypothetic accession year 2004 with different levels of direct payments' complementing from national budget has been applied. Model results have been compared with agricultural income in 2000 as representative pre-accession year. Results for 2004 depend on accession scenario but show the same trends regardless the model applied. Adopting EU position of complementing direct payments up to year 2001 level significant aggravation of farm incomes at aggregate level could be expected – according to EAA results for about 15 % and in accordance with APAS-PAM forecast even more than a quarter due to negative production effects, imposed by depressed price level. Complementing direct payments from national budget up to the level eligible by current Member states would not result in marked improvement of agricultural income. GVA estimates depend on the outcome of accession negotiations regarding production quotas and reference quantities. Nevertheless, adopting current position of EU would result in stagnation of activities with relative high price level in pre-accession period (pork, poultry) and improvement position of activities which receive greater support under CAP and which economic position was extremely unfavourable in the pre-accession period (beef, coarse grains). 100 % level of direct payments would drastically change support hierarchy of agricultural commodities in Slovenia, while the positive and negative effects would be almost balanced out at the aggregate level.

Key words: agriculture / policy / economics / direct payments / farm incomes / Slovenia / EU


Zb. Bioteh. Fak. Univ. Ljubl., Kmet. Zooteh., 80(December 2002)2, 129–145.

LABOUR SUPPLY AND EMPLOYMENT DECISIONS ON AGRICULTURAL HOUSEHOLDS IN SLOVENIA*

a)
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, asist., Ph.D., M.Sc.

Original scientific article
Language: Slovene

ABSTRACT
The paper attempts to quantify determinants influencing labour allocation decisions on agricultural households in Slovenia by application of an agricultural household model. The analysis investigates employment decisions of farm holders and their spouses, using the Census of Agriculture 2000 dataset. Results reveal that bulk of the farm labour input is performed by the work on a part-time basis, or by the work of household members surpassing active employment age. Employment decisions of the reference persons are most frequently linked with off-farm employment. Limited production capacities of farm holdings allow for full-time employment of one person at the most, on-farm employment being usually attributed to the farm holders. Holders’ employment status is primarily dependent on farm characteristics, own human capital, and personal preferences. Favourable conditions at the non-farm labour markets (‘demand-pull’ determinants) tend to increase probability of off-farm employment. Employment decisions of the partners (and presumably other household members) are in most cases narrowed to the choice between various alternatives of off-farm employment. On-farm employment prospects increase with the economic size of agricultural holding and eventual existence of a supplementary activity on the farm. The paper concludes by summarising main results and discussing their policy implications. Discussion confronts various policy objectives linked with agricultural employment and rural labour markets and calls for more elaborate set of measures to tackle them.

Key words: agriculture / agricultural holdings / employment / labour markets / models / Slovenia

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* The article presents a part of the results from dissertation thesis 'Modelling of employment decisions on farm households in Slovenia', carried out by the author under supervision of assoc. prof. Emil Erjavec, Ph.D.

Zb. Bioteh. Fak. Univ. Ljubl., Kmet. Zooteh., 80(December 2002)2, 147–155.

DEVELOPMENT OF A QUANTITATIVE MOLECULAR METHOD FOR ENUMERATION OF Salmonella enterica

Marija TRKOV and a)
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Assoc.Prof., Ph.D., M.Sc.

Original scientific article
Language: Slovene

ABSTRACT
A competitive polymerase chain reaction (c-PCR) was developed for rapid enumeration of Salmonella enterica cells in broth culture. The primers MINF and MINR-Hex ensured the methods specificity. An internal DNA control was prepared by enzymatic restriction and subsequent ligation of the flanking regions of the amplified 16S rRNA gene of S. Agona (U92197) strain. The prepared internal control had the same primer specific sequences as the target DNA but was 27 bp shorter. The c-PCR products were quantified by capillary electrophoresis and the results were obtained by regression analysis. Using the described system and 5 × 10–5 times diluted internal control, a quantification of S. enterica cells in broth culture in the range between 1.2 × 104 and 6 × 105 per reaction mixture was made possible.   The preliminary test showed that the results of the c-PCR quantification of the salmonella cells in broth culture are 2.9 times higher in comparison with the results of the indirect counting method. The authors are still convinced, however, that the method offers a rapid, specific and sufficiently accurate counting of S. enterica cells in natural microbiological samples.

Key words:  microbiology / bacteria / Salmonella enterica / molecular genetics / methods / c-PCR / capillary electrophoresis


Zb. Bioteh. Fak. Univ. Ljubl., Kmet. Zooteh., 80(December 2002)2, 157–167.

16S rRNA ANALYSIS OF BIFIDOBACTERIAL ISOLATES FROM RAT SMALL INTESTINE *

a), Franc Viktor NEKREP and Gorazd AVGUŠTIN
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
The amplified 16S rRNA genes from 6 isolates of bifidobacteria from rat small intestine and two isolates of lactobacilli were directly sequenced. A phylogenetic tree was constructed using the determined sequences and sequences of related genera from DNA databases. All bifidobacterial isolates belonged to the B. lactis group and formed two subgroups. The similarity levels between 16S rRNA sequences of isolates ranged from 91.4 to 95.8 %, showing great genetic variability among isolates. With similarity levels from 95 to 97 %, the phylogenetic analysis also showed that sequences of our isolates were closely related to B. pseudolongum. The results of previous phenotypic and genotypic studies and results obtained from the phylogenetic analysis of 16S rRNA sequences form the foundation for further analysis to confirm that our isolates represent one or more new bifidobacterial species.

Key words:  microbiology / bacteria / Bifidobacterium / molecular genetics / 16S rDNA / sequences / phylogeny / taxonomy / rats / small intestine

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* The article is a part of doctoral thesis 'Isolation and molecular identification of bifidobacteria from small intestine of rats fed with raw kidney bean (Phaseolus vulgaris L.)', issued by Lijana Fanedl, supervisor prof. Franc V. Nekrep, Ph.D., co-advisor assoc. prof. Gorazd Avguštin, Ph.D.

Zb. Bioteh. Fak. Univ. Ljubl., Kmet. Zooteh., 80(December 2002)2, 169–180.

THE ROLE OF HYPOTHALAMUS IN THE REGULATION OF ENERGY BALANCE AND MOUSE MODELS OF OBESITY *

a) and Simon HORVAT
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia, M.Sc.

Review article
Language: Slovene

ABSTRACT
Obesity is a complex trait determined by the action of many genetic and environmental factors. The genetic determinants are genes, involved in the control of energy balance, nutrient partitioning, lipid metabolism and behaviour. Central nervous system influences energy balance and body weight. Hypothalamus is a critical region of the brain for regulation of homeostatic processes. The sensory inputs are relayed to regulatory sites in the hypothalamus where the information is integrated and a neuro-humoral response initiated. Various hormones, neuropeptides and neurotransmitters are involved in this regulatory loop. The genetic basis of obesity is mostly polygenic. The development of obesity is controlled by several genomic regions named quantitative trait loci (QTL). Numerous and diverse rodent models of obesity are of great importance for understanding the genetics and physiology of obesity. Several monogenic mouse models have been used successfully to study the effects of single gene mutations on the development of obesity. On the other hand, mouse strains developed by long-term divergent selection for obesity-related traits are very useful models to characterize the complex genetic basis of obesity.

Key words: obesity / energy balance / central nervous system / hypothalamus / leptin / neuropeptides / neurotransmitters / monogenic mouse models / polygenic mouse models / mice

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* Part of this article originates from M.Sc. thesis 'Screening for differentially expressed genes in mouse lines differing by an obesity quantitative trait locus', issued by Uršula Lodge, supervisor ass.prof. Simon Horvat, Ph.D.

Zb. Bioteh. Fak. Univ. Ljubl., Kmet. Zooteh., 80(December 2002)2, 181–191.

CARNIOLAN BEE (Apis mellifera carnica Pollman) POPULATION DEFINITION AS BASED ON MITOCHONDRIAL DNA *

Peter KOZMUS a), Simona SUŠNIK, Janez POKLUKAR and Vladimir MEGLIČ
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia.

Original scientific paper
Language: Slovene

ABSTRACT
According to morphology, the carniolan bee (Apis mellifera carnica Pollman) is placed in South-Eastern European honey-bee group. All honey-bee subspecies are with regard to morphology and mtDNA variability divided into three main phylogenetic lineages. A. m. carnica and C phylogenetic lineage as a whole, is genetically poorly studied, therefore, carniolan bee has been characterised on the basis of mtDNA polymorphism. Fifty-six samples from Slovenia and 55 samples from other countries and selected lines were surveyed. Variable intergenic region between cytochrome-oxidase I (COI) and cytochrome-oxidase II (COII) in mtDNA was amplified. Polymorphism search was based on RFLP profiles and sequence analysis of this region. Five different haplotypes were determined, four of them being of C phylogenetic lineage origin. According to the results we can conclude that except in some selected lines, all populations analysed, including Slovenian ones, were not affected by introduction of non-native queen honey-bees.

Key words: bees / Carniolan bee / Apis mellifera carnica / molecular genetics / mitochondrial DNA / COI-II. region / Slovenia

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* The article is a part of graduation thesis 'Molecular characterisation of carniolan bee population (Apis mellifera carnica Pollman) as based on mitochondrial DNA', issued by Peter Kozmus, supervisor ass.prof. Janez Poklukar, Ph.D., co-advisor Simona Sušnik, Ph.D.

Zb. Bioteh. Fak. Univ. Ljubl., Kmet. Zooteh., 80(December 2002)2, 193–201.

GENETIC DIFFERENTIATION AMONG ISTRIAN PRAMENKA, BOVŠKA SHEEP AND JEZERSKO-SOLČAVSKA SHEEP

a), Drago KOMPAN and Peter DOVČ
a)
Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia., Ph.D., M.Sc.

Original scientific paper
Language: Slovene

ABSTRACT
We studied genetic relationship among three Slovenian autochthonous sheep breeds using microsatellite loci: MAF214, OarCP49, OarFCB11, MAF65, McM42, TGLA53, McM527 and OarAE119. Genotyping of 95 Istrian pramenka (ISP), 272 Bovška sheep (B) and 42 Jezersko-Solčavska sheep (JS) revealed in basically the same alleles in all the breeds. Furthermore, 12 alleles were frequent (> 10 %) in each of the breeds studied. However, we also detected 16 breed-specific alleles, 8 in ISP, 8 in B and 3 in JS. The correspondence analysis and assignment of individual genotypes to populations showed that the majority of ISP individuals formed one separate group, whereas groups of B and JS individuals were not clearly separated, probably due to many highly similar genotypes in both breeds. Estimation of genetic distances (pairwise FST values) confirmed closer relatedness of B and JS (FST = 0.044) than of ISP and B (FST = 0.064) or ISP and JS (FST = 0.075). About 6 % of the total variation which can be assigned to genetic differences among breeds (FST value) suggested that differences among breeds are not very large. We think that these results are in agreement with the hypothesis about the common origin of BS and JS in native primitive white sheep and origin of ISP in slightly distant “Zackel” sheep. However, to clarify the origin of Slovenian sheep breeds, additional studies of breeds which were probably involved in the origin of JS (Bergamasca and Padua sheep) and other “Pramenka” breeds should be performed.

Key words: sheep / autochthonous breeds / molecular genetics / microsatellite loci / genetic differentiation / Slovenia


Zb. Bioteh. Fak. Univ. Ljubl., Kmet. Zooteh., 80(December 2002)2, 203–211.

ISOLATION OF MICROSATELITE MARKERS BY FIASCO METHOD

Miha LAVRIČ and a)
a)
National Institute of Biology,Večna pot 111, SI-1000 Ljubljana, Slovenia, Ph.D.

Preliminary communication
Language: Slovene

ABSTRACT
The FIASCO (Fast Isolation by AFLP of Sequences Containing Repeats) method enables relatively fast isolation of microsatellite markers. It is appropriate for all organisms without regard to how frequent the microsatelite loci in the genome are. By FIASCO method we isolated microsatelite markers in the seabram (Pagellus erythrinus). DNA restriction was performed by MseI endonuclease. Restricted DNA was ligated with adapters MseIU and MseID. DNA fragments were amplified by PCR using degenerate primer MseI-N. We determined optimal conditions for PCR. Amplified DNA fragments were hybridized with biotinilated probe (AC)12. Probe-DNA complex was captured on magnetic beads coated with streptavidin, and an enriched fraction with microsatellites was amplified by PCR. Enriched microsatelite DNA was cloned into plasmid pCR® 2.1-TOPO and further transformed into Escherichia coli TOP10 cells. Twothousand fourhundred thirthysix white transformants were obtained and 18 of them were sequenced. We determined that 88.8 percentage of transformants containing dinucleotide microsatellite repeats. One tetranucleotide repeat was also found.

Key words: fish / teleosts / seabrams / Pagellus erythrinus / molecular genetics / microsatellites / methods / FIASCO

 

University of Ljubljana Biotechnical Faculty