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Acta agriculturae Slovenica, 90(December 2007)2, 69–83.

Agris category codes: /
COBISS Code           1.02
Language: Slovene

GENETIC MONITORING OF INBRED STRAINS

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a), Simon HORVAT and Damjana ROZMAN

a) Univ. v Ljubljani, Medicinska fak., Inštitut za patologijo, Medicinski eksperimentalni center, Zaloška 4, SI-1000 Ljubljana, Slovenija

ABSTRACT

With the advent of molecular genetics, inbred strains became one of the most powerful tools in biomedical research. Their applications are numerous and range from investigating basic mechanisms of genes and gene regulation to the generation of models of human diseases, which can be used for pathophysiological, biochemical, molecular and therapeutic studies. Therefore, the need for uniform and authentic animals within the genetically standardized strains is understandable and from the perspective of validity of results also necessary. The purpose of this article is to outline the potential sources of genetic variation of rodent (mainly mouse and rat) colonies and to describe the methods used to monitor or control this variation. These methodologies may be applied in both breeding centres and individual research laboratories.

Key words: molecular genetics / biomedical research / inbred strains / genetic drift / genetic variability /genetic monitoring / genetic markers / genetic polymorphisms / laboratory mice / laboratory rats
Acta agriculturae Slovenica, 90(December 2007)2, 85–95.

Agris category codes: L51
COBISS Code           1.01
Language: Slovene

THE COURSE OF FERMENTATION OF STARCH WITH THE ADDITION OF DIFFERENT TYPES OF TANNINS

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a) and Andrej LAVRENČIČ

a) Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia.

ABSTRACT

Four different concentrations (0 (control), 0.33, 0.67 and 1.33 mg ml–1 medium) of three tannin extracts (chestnut (F75) and quebracho (QUE) tannin extracts and tannic acid (TAK) were used to investigate their effect on the kinetics of in vitro fermentation of starch. Gas production was measured at 0, 2, 4, 6, 8, 10, 12, 24, 36, 48, 72 and 96 h after the start of incubation. Gompertz model was used to estimate kinetic parameters “B” (total potential gas production), “C” (relative degradation rate) and “A” (constant decay in relative degradation rate). First and second derivatives of Gompertz model were used to calculate the maximum fermentation rate (MFR) and time of maximum fermentation rates (TMFR). Addition of F75 (507.8 ml g–1 DM) and QUE (474.2 ml g–1 DM) significantly decreased (P < 0.05) total potential gas production compared to control (528.4 ml g–1 DM). On contrary, the addition of TAK (560.5 ml g–1 DM) significantly increased total potential gas production. Maximum fermentation rate of starch (50.6 ml h–1) occurred after almost 9 hours of incubation. The addition of tannin extracts significantly increased TMFR; this increase was greatest when 0.33 mg of tannin extracts were added to the medium. Type and concentration of tannin extracts had significant effect (P < 0.01) on maximum fermentation rate of starch. The lowest reduction in MFR was determined when F75 was used (MFR reduced to 42.0 ml h–1), while it was reduced to 38.1 ml h–1 when TAK and 34.7 ml g–1 when QUE were used. The greatest reduction in MFR was determined when the concentration of 0.67 mg of tannin extracts/ml medium was used.

Key words: animal nutrition / tannins / starch / fermentation / rumen / Gompertz / gas production
Acta agriculturae Slovenica, 90(December 2007)2, 97–106.

Agris category codes: L01
COBISS Code           1.04
Language: Slovene

THE USE OF TERMS WILD, BRED AND FARMED ANIMALS IN SLOVENE LEGISLATION

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a)

a) LUTRA, Inštitut za ohranjanje naravne dediščine, Opekarska 11, SI-1000 Ljubljana, Slovenia, M.Sc.

ABSTRACT

Agricultural biodiversiy includes, among other, wild animal species that are used or may be used for the production of food. Animals may be farmed or bred for food, wool, leather, furskin or for other economic purposes, but we can also breed them for company, recreation, protection or work. The purpose of farming and breeding is crucial for setting of criteria for handling individual animal or a groupof them. Legal purposes request precise and harmonised terminology. The paper deals with the use of terms such as animals of wild species kept in captivity, bred (game) animals, farmed (game) animals in Slovene regulation. In Slovene legislation there is no single act which holistically regulates breeding and farming of animals of wild species. The use of terms in regulations which partially deal with the subject is not harmonised and does not fully take into consideration the use of animals. The article gives the sugestions for subdivision and use of studied terms as well as changes of some legislation acts. The schematic representation of core differences between terms under consideration is presented.

Key words: legislation / regulations / terminology / wild animals / captivity / breeding / farming
Acta agriculturae Slovenica, 90(December 2007)2, 107–113.

Agris category codes: L51
COBISS Code           1.01
Language: English

EXAMINATION OF AI-2 QUORUM SENSING SYSTEM IN Prevotella bryantii AND Prevotella ruminicola-LIKE STRAINS BY USING BIOLUMINISCENCE ASSAY

 Gregor GORENC, Filip LUKÁŠ and

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a)

a) Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Chair for Microbiology and Microbial Biotechnology, Groblje 3, SI-1230 Domžale, Slovenia, Prof., Ph.D.

ABSTRACT

Rumen is an example of a complex microbial ecosystem where extensive intraspecies as well as interspecies cell-cell cross-communication is expected, but little is known about. Four ruminal Prevotella strains, Prevotella bryantii B14, TC1-1 and TF1-3, and P. ruminicola-like strain 223/M2/7A were examined for the presence of AI-2 type quorum sensing systems. Vibrio harveyi BB170 autoinducer bioassay was used in order to detect the production of AI-2 autoinducer in examined strains. Optimization of autoinducer bioassay was made to test the influence of sampling time and the substrate used in chemically defined medium CD on reporter strain luminescence signal. We discovered that AI-2 type qurum sensing system is present in P. ruminicola-like strain 223/M2/7A, which induced more than 74% of reporter strain bioluminescence, regardless of the presence of glucose in chemically defined medium CD. Such induction of bioluminescence was not observed in P. bryantii strains, however.

Key words: microbiology / rumen / Prevotella / quorum sensing / bioassay / V. harveyi BB170
Acta agriculturae Slovenica, 90(December 2007)2, 115–124.

Agris category codes: P01
COBISS Code           1.01
Language: Slovene

Evaluation of toxic and genotoxic potential in lake water samples by bioassays

Ilja Gasan OSOJNIK ČRNIVEC and

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a)

a) Univ. of Ljubljana, Biotechnical Fac., Zootechnical Dept., Groblje 3, SI-1230 Domžale, Slovenia., Prof., Ph.D., M.Sc.

ABSTRACT

Preservation of the natural resources, valuable natural features and spatial characteristics plays an important role in the environmental management and is based on permanent environmental monitoring. For the time being, the current legislation regarding environmental monitoring in Slovenia is based mostly upon physicochemical analyses. Since the physicochemical analyses do not provide information about biological effects, interactions between sample compounds and bioactivation, bioassays have been considered for environmental monitoring supplementation. In the present study the adequacy of a commercial toxicity screening test Thamnotoxkit FTM, which includes a freshwater crustacean Thamnocephalus platyurus and two genotoxicity determination test, a standard microbial Ames plate incoroporation test with Salmonella typhimurium TA97, TA98 and TA100 strains and the comet assay with the eukaryotic microorganism Tetrahymena thermophila has been evaluated. With the selected biotests toxic and genotoxic effects of lake water samples from Šalek valley were evaluated and compared with the measured physicochemical values.

Key words: microbiology / toxicity / genotoxicity / lakes / bioassays / environmental protection
Acta agriculturae Slovenica, 90(December 2007)2, 125–135.

Agris category codes: F01
COBISS Code           1.01
Language: English

EVALUATION OF ETHIOPIAN ISOLATES OF Pseudomonas fluorescens AS BIOCONTROL AGENT AGAINST POTATO BACTERIAL WILT CAUSED BY Ralstonia (Pseudomonas) solanacearum

Henok KUARABACHEW a), Fasil ASSEFA and Yaynu HISKIAS

a) Ethiopian Agricultural Research Organization, P.O.BOX 2003, Addis Ababa, Ethiopia.

ABSTRACT

A total of 50 fluorescent pseudomonas were collected from different potato growing areas in Ethiopia isolated and characterized, and evaluated on king’s B medium for their antibiosis towards Ralstonia solanacearum the pathogen of bacterial wilt of potato. Out of the 50 isolates only three i.e., Pf S2, Pf Wt3 and PfW1 showed inhibition against the growth of the pathogen. To test their antagonistic effect under greenhouse condition an experiment was conducted using sterilized soil. Tubers of bacterial wilt susceptible potato clone CIP 383031.15 were used. The potato tubers were dipped into 48 hrs old culture suspension of the three isolates i.e., Pf S2, Pf Wt3, PfW1 and Pfri (Indian reference strain) for 1 hr and planted in pots containing sterilized soil. Bacterization of tubers with isolates Pf S2, Pf Wt3, and PfW1, significantly reduced by 59.83% the incidence of bacterial wilt compared to the pathogen-inoculated control and increased plant growth (plant height and dry weight) by 59.83%, 76.89% and 28.44%, respectively. This suggests the importance of the studied isolates as plant growth-promoting rhizobacteria.

Key words: microbiology / biocontrol / Pseudomonas fluorescens / Ralstonia solanacearum / potatoes / potato bacterial wilt

 

University of Ljubljana Biotechnical Faculty